结合EGFR 3'UTR的蛋白质复合物的分离与鉴定
Isolation and Identification of the Protein Complex Binding to EGFR 3'Untranslated Region
近年来, 对mRNA UTR(untranslated region)的功能研究成为热点之一。mRNA UTR存在一些调控元件,如颈环结构等,与一些蛋白质或蛋白质复合物结合,从而影响该mRNA的转录、加工、出核和亚细胞定位、翻译以及翻译后修饰等。表皮生长因子受体(epidermal growth factor receptor,EGFR)是细胞信号转导的关键因子,因此对EGFR UTR在细胞中的功能研究就显得尤为重要。运用蛋白质亲和沉降(affinity pull down)和MALDI-TOF-TOF质谱分析技术,从HeLa全细胞裂解液中分离和鉴定与EGFR 3'UTR相互作用的蛋白质或蛋白质复合物。MALDI-TOF-TOF质谱分析鉴定出七种蛋白质。其中hnRNP Q、hnRNP I、hnRNP A3、hnRNP A1和hnRNP A2/B1等五种蛋白质属于不均一核糖核蛋白(Heterogeneous nuclear ribonucleoprotein)家族的蛋白;其他两种蛋白质分别为白细胞介素增强结合因子3(Interleukin enhancer-binding factor 3, ILF3)和透明质酸介导的迁移受体(Hyaluronan mediated motility receptor, RHAMM)。这些蛋白质多为RNA结合蛋白(RNA binding protein, RBP),参与维持mRNA稳定、亚细胞定位及蛋白质翻译等。这为研究EGFR 3'UTR的调控机制提供了参考依据。
In recent years, the function of Untranslated region(UTR) serves as one of the hotspots of biological research.There are some regulatory elements in the UTR of mRNA sequences, such as the stem loop structure. A number of proteins or protein complex may interact with these regulatory elements which may have an impact on mRNA transcription, processing, nuclear export and subcellular localization, translation and post-translational modifications consequently. Epidermal growth factor receptor(EGFR) is the key factor in singal transduction. Therefore, the function of EGFR UTR in cells is particularly important. In our study, the method of affinity pull down was used to isolate and identifie proteins or protein complex interacting with EGFR 3'UTR from whole cell lysate of HeLa. And then the MALDI-TOF-TOF mass spectrometry was used to analyse these proteins or protein complexes in order to clarify the potential function of EGFR 3'UTR in mRNA transport, mRNA stability, subcellular localization or translation. In our study, seven proteins which may interacted with EGFR 3'UTR have been identified using mass spectrometry. Among these proteins, hnRNP Q, hnRNP I, hnRNP A3, hnRNP A1 and hnRNP A2/B1 belong to heterogeneous nuclear ribonucleoprotein family. Other proteins including interleukin enhancer binding factor 3(ILF3) and hyaluronic acid receptor-mediated migration(RHAMM). These proteins we have identified in this study were mostly RNA binding proteins (RBP), which could be involved in maintaining stability, subcellular localization and protein translation of mRNA. The findings in our study will provide some reference valuable to further investigate the regulatory mechanism of EGFR 3'UTR.
丁明、赵辅昆、管国波、王大巾、张风群、戚玺君、刘玮婧、吴仪
分子生物学细胞生物学生物化学
EGFR3'UTRILF3蛋白质亲和沉降技术质谱
EGFR3'UTRILF3affinity pull downmass spectrometry
丁明,赵辅昆,管国波,王大巾,张风群,戚玺君,刘玮婧,吴仪.结合EGFR 3'UTR的蛋白质复合物的分离与鉴定[EB/OL].(2010-12-27)[2025-07-20].http://www.paper.edu.cn/releasepaper/content/201012-1133.点此复制
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