马尾松花粉超低温保存的生理响应及转录组分析
Physiological response and transcriptome analysis to cryopreservation of Masson Pine (Pinus massoniana) pollen
为初步解析马尾松花粉对超低温保存的生理响应及相关代谢机制,该文以马尾松花粉为研究对象,在-196 ℃液氮进行超低温保存并分析冷存过程中(冻存前CK,液氮冻存后LN,化冻后HD)与ROS 相关的生理指标及转录组数据。结果表明:(1)马尾松花粉超低温保存的最适含水量为3.96%,该含水量下将花粉直接投入液氮保存48 h,冻存前后花粉存活率分别为78.54%和73.80%。(2)SOD,GSH,APX,抑制羟自由基能力4 个指标在冻存前后差异显著。(3)转录组测序共获得65.60 Gb 过滤数据,有38 505 个基因比对到参考基因组(47.84%),CK vs LD,CK vs HD,LD vs HD 的差异表达基因(DEGs 数量分别为232、268和218 个)。GO 和KEGG 分析表明,应激响应(Response to stimulus)和抗氧化活性(Antioxidantactivity)等GO term 显著富集;植物激素信号转导、MAPK 信号途径、淀粉和蔗糖代谢、果糖和甘露醇代谢、过氧化物酶体等KEGG 途径显著富集,从这些途径中进一步筛选到10 个可能与冷冻保存过程中损伤与修复有关的基因。该研究结果为马尾松种质资源高效利用和安全保存提供了技术手段,也为进一步解析冷冻保存损伤的分子机制提供参考。
his study aimed to investigate the response mechanism of Pinus massoniana pollen tocryopreservation. Pollen of P. massoniana was cryopreserved within liquid nitrogen (LN), at-196 . Eleven physiological indexes related to reactive oxygen species (ROS) were assessedduring the freezing process (ck: before freezing, LN: after freezing, HD: after freezing andthawing). Transcriptome sequencing was also performed using the next generationsequencing( NGS) technology and Illumina HiSeq TM 6 000 platform. The results were as follows:(1) The optimal water content for cryopreservation was 3.96 % (fresh weight basis). At this water content, the P. massoniana pollen was transferred to 2 mL cryovials and directly immersed in liquidnitrogen, where it was stored for at least 48 h, then was removed from liquid nitrogen and transferred toroom tempreture for 20 minites to achieve thawing. The survival rate was 73.80 % after freezing andthawing, compared with 78.54 % before freezing. (2) During the cryopreservation process,significant differences were observed in the four indexes of superoxide dismutase (SOD),glutathione (GSH), ascorbate peroxidase (APX), and the ability to inhibit hydroxyl free radicals. (3)A total of 65.60 Gb clean data were obtained, with 38 505 genes mapped to the reference genome(47.84 %); The number of differentially expressed genes (DEGs) in comparisons between controland freezing treatment (CK vs LD), control and thawing treatment (CK vs HD), and freezing andthawing treatment (LD vs HD) were 232, 268, and 218, respectively. In the current study, GeneOntology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyseswere performed, and revealed a group of genes related to response to stimulus and antioxidantactivity; and genes encoded some key proteins in plant hormone signal transduction, MAPKsignaling pathway, Starch and sucrose metabolism, Fructose and mannose metabolism, andperoxisome pathways. Ten of DEGs screened in these pathways may be closely related toprotection and repair during freezing and thawing process. All the results indicate that the freezingand thawing process which related to oxidative stress induced by ROS affect the cryopreservationof P. massoniana pollen, as well as the water content. Our results help to improve the efficient ofpreservation and utilization of the pollen of Pinus massoniana, and also provided reference forfurther analysis of the molecular mechanism of its freezing mechanism.
覃子海、魏秋兰、肖玉菲、林东、刘海龙、张晓宁、张烨、徐展武
10.11931/guihaia.gxzw202403015
分子生物学生理学植物学
马尾松花粉超低温保存生理转录组
Pinus massonianapollencrypreservationphysiologytranscriptome sequencing
覃子海,魏秋兰,肖玉菲,林东,刘海龙,张晓宁,张烨,徐展武.马尾松花粉超低温保存的生理响应及转录组分析[EB/OL].(2024-09-22)[2025-08-18].https://chinaxiv.org/abs/202409.00201.点此复制
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