A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data
A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data
MicrobeMASST, a taxonomically-informed mass spectrometry (MS) search tool, tackles limited microbial metabolite annotation in untargeted metabolomics experiments. Leveraging a curated database of >60,000 microbial monocultures, users can search known and unknown MS/MS spectra and link them to their respective microbial producers via MS/MS fragmentation patterns. Identification of microbial-derived metabolites and relative producers, without a priori knowledge, will vastly enhance the understanding of microorganisms' role in ecology and human health.
Costa-Lotufo Leticia Veras、Tugizimana Fidele、Roxborough Eve Tallulah、Carrillo Terrazas Marvic、Quiros-Guerrero Luis-Manuel、Traxler Matthew F.、Pessotti Rita de Cassia、Tamayo-Castillo Giselle、Chaverri Priscila、Escudero-Leyva Efrain、Bory Alexandre Jean、Wolfender Jean-Luc、Sichert Andreas、Pullman Benjamin S、Bandeira Nuno、Massana-Codina Josep、Wagner Berenike C.、Forchhammer Karl、Bourceau Patric、Perez-Lorente Alicia Isabel、Molina-Santiago Carlos、Vera Ponce de Leon Arturo、Pope Phillip Byron、La Barbera Giorgia、Laursen Martin Frederik、Siewert Bianka、Licona-Cassani Cuauhtemoc、Rodriguez-Orduna Lorena、O'Neill Ellis Charles、Bale Nicole J.、Zuffa Simone、P. Gomes Paulo Wender、El Abiead Yasin、Gentry Emily C.、Zemlin Jasmine、Meehan Michael J.、Cichewicz Robert H.、Buzun Ekaterina、Vasquez Ayala Adriana、Dubery Ian A.、Lopes Norberto Peporine、Jimenez Paula C.、Patterson Andrew D.、Silva Fernanda Motta Ribeiro、Silva Denise Brentan、Koolen Hector H. F.、Mohimani Hosein、Broders Kirk、Dorrestein Pieter C.、McDonald Daniel、Schoeny Harald、Clement Jason A.、Zhao Jiaqi、Sinninghe Damste Jaap S.、Franke Raimo、Hildebrand Felina、Hohenwallner Katharina、Ding Su、Moreira Eduarda Antunes、Guan Xueli Li、Grundmann Carlismari、da Silva Gilvan Ferreira、La Rosa Sabina Leanti、Avalon Nicole E.、Hsu Chia-Yun、Romero Diego、Garg Neha、Odoi Jane、Aron Allegra T.、Schmid Robin、Ober-Singleton Sidnee E.、Panzenboeck Lisa、Madala Ntakadzeni Edwin、Oles Renee、Allard Pierre-Marie、Joubert Juliette、Alvarado-Villalobos Daniel、Hammerle Fabian、Koellensperger Gunda、Liebeke Manuel、Jackrel Sara L.、Petras Daniel、Rutz Adriano、Gindro Katia、Gadhavi Henna、Peintner Ursula、Rath Christopher M.、Cui Jerry J.、Nephali Lerato Pertunia、Bronstrup Mark、Rampler Evelyn、McPhail Kerry L.、Kuijpers Mirte C. M.、Wang Mingxun、Gerwick William H.、Aiosa Nicole、Rimal Bipin、Ju Kou-San、Silva dos Santos Mariana、Kang Kyo Bin、Bauermeister Anelize、Knight Rob、Rezende-Teixeira Paula、Caraballo-Rodriguez Andres M.、Pontrelli Sammy、Chu Hiutung、Gregor Rachel、Roager Henrik M.、de Carvalho Luiz Pedro Sorio
微生物学生物科学研究方法、生物科学研究技术生物化学
Costa-Lotufo Leticia Veras,Tugizimana Fidele,Roxborough Eve Tallulah,Carrillo Terrazas Marvic,Quiros-Guerrero Luis-Manuel,Traxler Matthew F.,Pessotti Rita de Cassia,Tamayo-Castillo Giselle,Chaverri Priscila,Escudero-Leyva Efrain,Bory Alexandre Jean,Wolfender Jean-Luc,Sichert Andreas,Pullman Benjamin S,Bandeira Nuno,Massana-Codina Josep,Wagner Berenike C.,Forchhammer Karl,Bourceau Patric,Perez-Lorente Alicia Isabel,Molina-Santiago Carlos,Vera Ponce de Leon Arturo,Pope Phillip Byron,La Barbera Giorgia,Laursen Martin Frederik,Siewert Bianka,Licona-Cassani Cuauhtemoc,Rodriguez-Orduna Lorena,O'Neill Ellis Charles,Bale Nicole J.,Zuffa Simone,P. Gomes Paulo Wender,El Abiead Yasin,Gentry Emily C.,Zemlin Jasmine,Meehan Michael J.,Cichewicz Robert H.,Buzun Ekaterina,Vasquez Ayala Adriana,Dubery Ian A.,Lopes Norberto Peporine,Jimenez Paula C.,Patterson Andrew D.,Silva Fernanda Motta Ribeiro,Silva Denise Brentan,Koolen Hector H. F.,Mohimani Hosein,Broders Kirk,Dorrestein Pieter C.,McDonald Daniel,Schoeny Harald,Clement Jason A.,Zhao Jiaqi,Sinninghe Damste Jaap S.,Franke Raimo,Hildebrand Felina,Hohenwallner Katharina,Ding Su,Moreira Eduarda Antunes,Guan Xueli Li,Grundmann Carlismari,da Silva Gilvan Ferreira,La Rosa Sabina Leanti,Avalon Nicole E.,Hsu Chia-Yun,Romero Diego,Garg Neha,Odoi Jane,Aron Allegra T.,Schmid Robin,Ober-Singleton Sidnee E.,Panzenboeck Lisa,Madala Ntakadzeni Edwin,Oles Renee,Allard Pierre-Marie,Joubert Juliette,Alvarado-Villalobos Daniel,Hammerle Fabian,Koellensperger Gunda,Liebeke Manuel,Jackrel Sara L.,Petras Daniel,Rutz Adriano,Gindro Katia,Gadhavi Henna,Peintner Ursula,Rath Christopher M.,Cui Jerry J.,Nephali Lerato Pertunia,Bronstrup Mark,Rampler Evelyn,McPhail Kerry L.,Kuijpers Mirte C. M.,Wang Mingxun,Gerwick William H.,Aiosa Nicole,Rimal Bipin,Ju Kou-San,Silva dos Santos Mariana,Kang Kyo Bin,Bauermeister Anelize,Knight Rob,Rezende-Teixeira Paula,Caraballo-Rodriguez Andres M.,Pontrelli Sammy,Chu Hiutung,Gregor Rachel,Roager Henrik M.,de Carvalho Luiz Pedro Sorio.A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data[EB/OL].(2025-03-28)[2025-06-07].https://www.biorxiv.org/content/10.1101/2023.07.20.549584.点此复制
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