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Linear indexing for all strings under all internal nodes in suffix trees

Linear indexing for all strings under all internal nodes in suffix trees

来源:bioRxiv_logobioRxiv
英文摘要

Suffix trees are fundamental data structure in stringology. In this work, we introduce two algorithms that index all strings/suffixes under all internal nodes in suffix tree in linear time and space. These indexes can contribute in resolving several strings problems such as DNA sequence analysis and approximate pattern matching problems.

Tbakhi Abdelghani、Al-okaily Anas

10.1101/2021.10.25.465764

计算技术、计算机技术

Tbakhi Abdelghani,Al-okaily Anas.Linear indexing for all strings under all internal nodes in suffix trees[EB/OL].(2025-03-28)[2025-04-26].https://www.biorxiv.org/content/10.1101/2021.10.25.465764.点此复制

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