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双链DNA电子结构与光学跃迁吸收谱研究

Electronic structure and optical transitions absorption spectrum in Double-stranded DNA chains

中文摘要英文摘要

在紧束缚近似下,计算了双链DNA两种不同碱基组份情况下的能带结构,电子态密度、光学跃迁吸收谱,并研究了格点能量无序度对双链DNA电子态密度以及光学跃迁的影响。计算结果表明:poly(G)-poly(C) DNA与poly(A)-poly(T) DNA的能带结构都呈现出间接带隙半导体能带结构特征;电子态密度分布区间随着无序度的增大而展宽,且能隙逐渐消失。poly(G)-poly(C) DNA与poly(A)-poly(T) DNA的平行极化光学跃迁吸收谱的共振吸收峰值位置分别为1.87 和0.76 ,而对于垂直极化光学跃迁吸收谱,poly(G)-poly(C) DNA与poly(A)-poly(T) DNA其吸收边分别为 和 ,并在高、低能区都存在吸收峰,且平行极化与垂直极化光学跃迁吸收之间存在竞争效应。随着碱基位能无序度的增大,两种双链DNA的平行极化吸收谱的能量区域均展宽,但poly(A)-poly(T) DNA的平行极化吸收谱在低能区的变化更加明显;而对于垂直极化光学跃迁吸收谱,随着无序度的增大高能区的吸收峰消失,吸收能量区域迅速展宽,但poly(G)-poly(C) DNA的吸收峰位置向低频移动的趋势较poly(A)-poly(T) DNA的更加明显。

In this paper,based on the tight-binding model, we calculate the energy band structure, electron density and optical transitions absorption spectrum with two different base components of DNA sequences. By considering the influence of disorder in the base energies, we also analysis and compare the electron density and the optical transitions absorption spectrum of both DNA sequences. The results show that the electronic band structure of the poly (G)-poly(C) DNA and poly(A)-poly(T) DNA turn out the indirect band gap semiconducting electronic structure behavior. The band gap gradually disappears and the energy region broadens with the increasing of the magnitude of disorder. The parallel polarization absorption peak sites of the poly(G)-poly(C) DNA and poly(A)-poly(T) DNA are 1.87and 0.76 respectively, while the perpendicular polarization absorption edges of poly(G)-poly(C) DNA and poly(A)-poly(T) DNA are 1.84 and 0.68 respectively. In both low-energy and high-energy range, there exist perpendicular polarization absorption peaks. And there exist competition effect between the perpendicular and parallel polarization. With increasing of the disorder, both parallel polarization and perpendicular polarization absorption spectrum broadens. However, the phenomenon that poly(A)-poly(T) DNA change more significantly than the poly(G)-poly(C) DNA in the low energy region is revealed. As for the perpendicular polarization absorption spectrum, the peak in high energy region disappears with the increasing of disorder while the one in low energy region exhibits more tendency towards to lower frequency for poly(G)-poly(C) DNA.

朱佳、徐慧

生物物理学物理学

凝聚态物理双链DNA无序度能带电子态密度光学跃迁吸收谱

condensed matter physicsNAdisorderenergy bandelectron densityabsorption spectrum

朱佳,徐慧.双链DNA电子结构与光学跃迁吸收谱研究[EB/OL].(2011-03-09)[2025-08-03].http://www.paper.edu.cn/releasepaper/content/201103-402.点此复制

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