番茄MIKCc型MADS-Box基因保守模式和启动子的信息学分析
In Silico Conserved Motif and Promoter Analysis of the MIKCc-type MADS-Box Genes in Tomato
综植物中,MADS-box基因家族参与了植物所有发育的调控,尤其是参与拟南芥等被子植物花发育的调控。为了研究这些基因在调控功能上的分化现象,对番茄基因组中42个MIKCc型MADS-box基因进行了分析,其中7个基因未见报道。在蛋白质保守区、启动子模式和基因组定位等方面对这些基因进行了比较研究。结果表明这些基因可能是通过复制和特化过程产生分化现象的,并可能通过多倍体化的片段复制产生新的基因。总之,对番茄MADS-box基因家族进行比较有利于我们进一步研究高等植物MADS-box基因家族的调控机制。
In plants, MADS-box genes have been shown to be involved in all aspects of plant development, especially in flower development in angiosperms such as Arabidopsis. To understand the diversity in regulation present in these subfamilies, we investigated 42 MIKCc-type MADS-box genes from the genome of tomato, including 7 genes that have not previously been characterized. Using these sequences, we have performed a comparative analysis of tomato MIKCc-type MADS-box genes, including the description of the protein conserved motif, promoter motif and genome localization of each member. Our results suggest that many genes have diverged in their sequences after duplication and/or speciation. They also suggest that these genes may have evolved through segmental duplication events produced by polyploidy events in the past. Overall, the comparative analysis of the tomato MIKCc-type MADS-box genes will be expected to result in significant progress in investigating the regulation mechanism of MADS-box genes in higher plants.
陈秀玲、李景富、陈宏宇、王傲雪
遗传学分子生物学植物学
分子生物学MADS-box基因番茄
molecular biologyMADS-box genestomato
陈秀玲,李景富,陈宏宇,王傲雪.番茄MIKCc型MADS-Box基因保守模式和启动子的信息学分析[EB/OL].(2013-01-16)[2025-05-22].http://www.paper.edu.cn/releasepaper/content/201301-696.点此复制
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