芸香科柑橘黄龙病较耐病寄主植物NBS-LRR类RGA的分离鉴定及表达分析
Isolation, characterization and expression analysis of resistance gene analogs (RGAs) in plants related to Huanglongbing(HLB)
柑橘黄龙病(Huanglongbing,HLB)是影响全球柑橘产业的一种毁灭性病害,至今还未有商用的抗性品种问世。根据已克隆的植物抗性基因表达产物NBS(nucleotide binding site)保守区域设计简并引物,从田间HLB难感病芸香科寄主植物九里香和柚子基因组DNA中扩增抗病基因同源序列(Resistance gene analogs,RGAs),共获得43个抗性基因同源序列。NCBI比对结果显示43个片段与已知抗性基因及已克隆的抗性基因同源序列具有不同程度的同源性,其中有12个RGAs能翻译成完整连续的氨基酸序列。通过Clustalx、DNAMAN等软件分析获得的RGAs及其推导的氨基酸的同源性,结果显示它们都包含NBS-LRR类抗性基因所具有的保守区域:P-loop、Kinase-2a、GLPLAL,其与已克隆的烟草N、亚麻L6、拟南RPS2、RPS5、RPP8、RPM1等抗病基因在保守区域氨基酸水平上的同源性为37.39%-43.43%,可望进一步用于HLB抗病基因的分子筛选及遗传图谱的构建。另外,以柚子cDNA为模板进行PCR扩增和RFLP分析得到5个NBS类抗病基因同源序列(RGAs),对5个RGAs在HLB侵染过程中的表达进行实时荧光定量PCR,结果显示嫁接病芽后的八个月五个RGA的表达都有变化, 表明其可能与黄龙病的侵染有关。
itrus production is seriously affected by HLB to which no resistant plant is available in the cultivated germplasm. Degenerate primers designed based on conserved NBS (nucleotide binding site) motifs contained in some plant resistance genes were used to isolate analogous sequences called resistance gene analogs (RGAs). About xx resistance gene analogs (RGAs) were cloned from several spices related to HLB using PCR method with primers above-mentioned. The BLASTN searches revealed that 43 DNA fragments showed different sequence homology with known plant R-genes or deposited RGAs and 12 sequences could be translated to polypeptides without stop codons. These RGAs and 12 deduced amino acid were analyzed by Clustalx and DNAMAN software. Sequence analysis showed these RGAs contain the conserved domains P-loop, Kinase-2a, Kinase-3a, and HD, which was conserved in NBS-LRR type disease resistance gene. These 12 RGAs shared 37.39%-43.43% identity with the resistance genes of TobaccoN、FlaxL6、Arabidopsis thaliana RPS2、RPS5、RPP8、RPM1. Gene duplication followed by sequence divergence were proposed as the mode for the evolution of a large number of distantly or closely related RGA genes in plants, and this mode may play a role in the generation of new resistance speci?city and cloning related resistance genes about HLB. In addition, using PCR amplification from cDNA of Citrus maxima and RFLP, 5RGAs were successfully obtained, with GenBank accession numbers of HM777043-HM777043. The Quantitative Real-time PCR results showed that expression of 5 RGAs changed differently. Therefore, it suggested that these RGAs might play important roles in disease resistance in defense response pathway.
刘婷婷、王中康、林亚玉、殷幼平
植物保护植物学农业科学研究
抗性基因同源序列HLBNBS保守区域简并引物柚子cDNA定量PCR
Huanglongbing(HLB)Resistance gene analogs(RGAs)NBS conserved regionegenerate primerscDNA of Citrus maximaQuantitative Real-time PCR
刘婷婷,王中康,林亚玉,殷幼平.芸香科柑橘黄龙病较耐病寄主植物NBS-LRR类RGA的分离鉴定及表达分析[EB/OL].(2010-12-13)[2025-08-16].http://www.paper.edu.cn/releasepaper/content/201012-367.点此复制
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