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猪α(1, 2)岩藻糖转移酶(FUT1)基因启动子区克隆及多态性分析

loning and polymorphism analysis of promoter region of porcine α-l,2 fucosyltransferase (FUT1) gene

中文摘要英文摘要

本研究旨在克隆和分析猪α-(1,2)岩藻糖转移酶基因1(FUT1)的上游序列,为稳定遗传的功能多态位点的筛选和确定,以及开展FUT1基因的启动子区调控机理研究奠定基础。运用染色体步移技术扩增出FUT1基因序列并利用生物信息学方法对该序列进行分析,运用PCR-SSCP方法对该段序列在野猪和11个不同猪品种中的多态性进行分析。结果表明,获得的1150 bp FUT1基因上游调控区序列存在3个CpG岛,启动子和转录因子结合位点的特征分析显示,该序列存在Sp1、c-Ets、GATA-1和GATA-2转录因子结合位点;PCR-SSCP结果显示,FUT1基因的启动子区存在一个T(-726)C的突变位点,共检测到3种基因型,定义为AA、AB和BB,3种基因型分布在国内地方猪品种和国外引进品种间差异显著。本试验结果进一步证实,中国地方猪种和引进猪种F18大肠杆菌抗性的遗传基础存在明显差异,这种差异可能与FUT1基因启动子区T(-726)C位点变异有关。

he aim of the study is to provide a theoretical foundation for screening and determining stable genetic marker, as well as conducting the research of regulatory mechanism of porcine FUT1 gene.FUT1 gene upstream sequence was obtained by genome walking and analyzed by bioinformatics, and the polymorphism in wild boar and 11 different pig breeds were investigated by PCR-SSCP. The results showed that 1150 bp FUT1 gene promoter sequence successfully attained by twice genome walking and there were 3 CpG islands , the analysis of characteristics of the promoter and transcription factor binding sites showed there are Sp1, c-ETS of GATA-1 and GATA-2 existing; the results of PCR-SSCP analysis showed that there existed only a T(-726)C point mutation and 3 genotypes which was defined AA, AB and BB. Difference of genotype distribution between domestic pigs and foreign was significant.. This study further confirmed that the genetic basis which resistance to F18 E. coli was significant differences between Chinese native pig breeds and western pig breeds, which may be related to the T(-726)C point mutation in FUT1 gene promoter.

包文斌、吴正常、吴圣龙、霍永久、赵乔辉、朱世平、郑先瑞、王靖

遗传学分子生物学动物学

FUT1基因启动子区多态性分析染色体步移

FUT1 genepromoter regionpolymorphism analysisgenome walking

包文斌,吴正常,吴圣龙,霍永久,赵乔辉,朱世平,郑先瑞,王靖.猪α(1, 2)岩藻糖转移酶(FUT1)基因启动子区克隆及多态性分析[EB/OL].(2012-12-05)[2025-08-16].http://www.paper.edu.cn/releasepaper/content/201212-54.点此复制

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