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FASTGenomics: An analytical ecosystem for single-cell RNA sequencing data

FASTGenomics: An analytical ecosystem for single-cell RNA sequencing data

来源:bioRxiv_logobioRxiv
英文摘要

Recent technological advances enable genomics of individual cells, the building blocks of all living organisms. Single cell data characteristics differ from those of bulk data, which led to a plethora of new analytical strategies. However, solutions are only useful for experts and currently, there are no widely accepted gold standards for single cell data analysis. To meet the requirements of analytical flexibility, ease of use and data security, we developed FASTGenomics (https://fastgenomics.org) as a powerful, efficient, versatile, robust, safe and intuitive analytical ecosystem for single-cell transcriptomics.

Becker Matthias、G¨1nther Patrick、Balfer Jenny、Angerer Philipp、Heilig Mathias、K?hler Meike、Mazurkiewicz Thomas、M?nnighoff Martin、Weigelt Roland、Ulas Thomas、Theis Fabian、Schultze Joachim L.、Heikamp Kathrin、Schick Albrecht、Ba?ler Kevin、Scholz Claus J.、Huthmacher Stephan、Dickten Henning、Winkler Martin、Karle Ralf、Biernat Pawe?、Fl?er Lars、Sauer Christian、Kratsch Christina、Schlemm Gerhard

Genomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of BonnGenomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of BonnComma Soft AGComma Soft AG||Institute of Computational Biology, German Research Center for Environmental Health, Helmholtz Center MunichComma Soft AGComma Soft AGComma Soft AGComma Soft AGComma Soft AGGenomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of BonnInstitute of Computational Biology, German Research Center for Environmental Health, Helmholtz Center MunichGenomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of Bonn||Platform for Single Cell Genomics and Epigenomics, German Center for Neurodegenerative Diseases and the University of BonnComma Soft AGComma Soft AGGenomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of BonnGenomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of BonnComma Soft AGComma Soft AGComma Soft AGComma Soft AGGenomics and Immunoregulation, Life & Medical Sciences (LIMES) Institute, University of BonnComma Soft AGComma Soft AGComma Soft AGComma Soft AG

10.1101/272476

生物科学研究方法、生物科学研究技术计算技术、计算机技术分子生物学

single cell genomicssingle cell RNA-sequencingecosystemsystems biology

Becker Matthias,G¨1nther Patrick,Balfer Jenny,Angerer Philipp,Heilig Mathias,K?hler Meike,Mazurkiewicz Thomas,M?nnighoff Martin,Weigelt Roland,Ulas Thomas,Theis Fabian,Schultze Joachim L.,Heikamp Kathrin,Schick Albrecht,Ba?ler Kevin,Scholz Claus J.,Huthmacher Stephan,Dickten Henning,Winkler Martin,Karle Ralf,Biernat Pawe?,Fl?er Lars,Sauer Christian,Kratsch Christina,Schlemm Gerhard.FASTGenomics: An analytical ecosystem for single-cell RNA sequencing data[EB/OL].(2025-03-28)[2025-08-02].https://www.biorxiv.org/content/10.1101/272476.点此复制

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